BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D02LP1|AL429377
(522 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig969 638 0.0
>3x_Contig969
Length = 3546
Score = 638 bits (320), Expect = 0.0
Identities = 354/365 (96%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 158 aggcaacaaccagggtttcggttccaagacattwaaatggcaccaaatgaaagaatgttt 217
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 aggcaacaaccagggtttcggttccaagaggtttaaatggcaccaaatgaaagaatgttt 60
Query: 218 catggacatgagaacttggttgtacttcctaattgggatcagtgttgcgattccaaacgg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catggacatgagaacttggttgtacttcctaattgggatcagtgttgcgattccaaacgg 120
Query: 278 aggtatcagttctttcggttccattatcttgaargggttcggttattcmactgaaaaatc 337
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 121 aggtatcagttctttcggttccattatcttgaaggggttcggttattccactgaaaaatc 180
Query: 338 gttactaatgaaggccccaatcggtgcctgttaattggttggacttgtcattctaccctt 397
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 181 gttactaatgaaggccccaatcggtgcctgtgaattggttggacttgtcattctaccctt 240
Query: 398 gatctcttacttcatcagtaagagaattatcatagccgtattctatttgctggtttgtgt 457
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 gatctcttacttcatcagtaagagaatgatcatagccgtattctatttgctggtttgtgt 300
Query: 458 catgtctacttgtctacttncattttctaagaacaaaaacgttggccttaacgcggttac 517
||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||
Sbjct: 301 catgtctacttgtctacttgcattttctaagaacaaaaacgtt-gccttagc-cggttac 358
Query: 518 tatat 522
|||||
Sbjct: 359 tatat 363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3240
Number of Sequences: 1807
Number of extensions: 3240
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 522
length of database: 10,358,551
effective HSP length: 16
effective length of query: 506
effective length of database: 10,329,639
effective search space: 5226797334
effective search space used: 5226797334
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)